BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F12LP1|AL428097
(1016 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1537 1935 0.0
>3x_Contig1537
Length = 10796
Score = 1935 bits (975), Expect = 0.0
Identities = 1012/1019 (99%), Gaps = 5/1019 (0%)
Strand = Plus / Minus
Query: 3 tcgctgtacttgttgtagacatacacatactccaacacacagaaatatgaaattactgca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 tcgctgtacttgttgtagacatacacatactccaacacacagaaatatgaaattactgca 2246
Query: 63 atcattgccagggcttggcactagctgttccaaaatggtaatcggtaataggtactcgat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 atcattgccagggcttggcactagctgttccaaaatggtaatcggtaataggtactcgat 2186
Query: 123 aatccaaaagagaggcccggcgaaattatttatcaatgggatacggtataactcgagcaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 aatccaaaagagaggcccggcgaaattatttatcaatgggatacggtataactcgagcaa 2126
Query: 183 ggtcgaaccatcgaaaattgatgataggctgcatcggctgatcaaaaagtccaaattcct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2125 ggtcgaaccatcgaaaattgatgataggctgcatcggctgatcaaaaagtccaaattcct 2066
Query: 243 gacaagattgaacggtaatcctcgttacaaacattatttcgataaactttctgaagccgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 gacaagattgaacggtaatcctcgttacaaacattatttcgataaactttctgaagccgg 2006
Query: 303 cgccgtttctacaatgacatcattcttaatccttcacgaaattactgctatcgttccttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 cgccgtttctacaatgacatcattcttaatccttcacgaaattactgctatcgttccttt 1946
Query: 363 gtttgctctatggggactgctttataacttagatctgtctgaccaatatgagatgccagt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 gtttgctctatggggactgctttataacttagatctgtctgaccaatatgagatgccagt 1886
Query: 423 atatttcaaggatttgttgaacaaatgtggtgaaagtataggtaaattaattggagatta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 atatttcaaggatttgttgaacaaatgtggtgaaagtataggtaaattaattggagatta 1826
Query: 483 cgataatggctgggatagagatagattagttgtatctggggctcttgcatacgccattgt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 cgataatggctgggatagagatagattagttgtatctggggctcttgcatacgccattgt 1766
Query: 543 taaagtattgtatcctgctcggatacttttcagtttatgggcagctccatatgttggaac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 taaagtattgtatcctgctcggatacttttcagtttatgggcagctccatatgttggaac 1706
Query: 603 tttcgtaataatgccttttaccaaacttagggcattaattcgtcgttgagctaaaacctg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 tttcgtaataatgccttttaccaaacttagggcattaattcgtcgttgagctaaaacctg 1646
Query: 663 atcttccattggcactgatgtaaatagactaatttatatatagactcgcattcatcttat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 atcttccattggcactgatgtaaatagactaatttatatatagactcgcattcatcttat 1586
Query: 723 tattataaaacttcatggatcatatttatgaagacaactacgattagtttacagttagtg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 tattataaaacttcatggatcatatttatgaagacaactacgattagtttacagttagtg 1526
Query: 783 tctcaaatccttgataatagtaataaattcagctacgactaactatttattcatgataca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 tctcaaatccttgataatagtaataaattcagctacgactaactatttattcatgataca 1466
Query: 843 acgacatatcaggccagagttggctactttattatctaatgactctttcttcacagaaca 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 acgacatatcaggccagagttggctactttattatctaatgactctttcttcacagaaca 1406
Query: 903 acgaatggttcttatattgacgtttttataagaa-ttwaagcg-agtgatccattag-aa 959
|||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| ||
Sbjct: 1405 acgaatggttcttatattgacgtttttataagaatttaaagcgaagtgatccattagaaa 1346
Query: 960 aatgattaaacgttgaacgctttgag-atataaagac-agctctcggcggatamagcat 1016
|||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||
Sbjct: 1345 aatgattaaacgttgaacgctttgagaatataaagacaagctctcggcggatacagcat 1287
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7296
Number of Sequences: 1807
Number of extensions: 7296
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 1016
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1000
effective length of database: 10,329,639
effective search space: 10329639000
effective search space used: 10329639000
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)